Chemical informatics for
libraries
presentation references
Jeffery Loo
NLM Associate Fellow
03-05
Excellent resources
Chemoinformatics: a
textbook.
Gasteiger J, Engel T, eds.
Handbook of
chemoinformatics: from data to knowledge. (4 volumes)
Johann Gasteiger,
ed.
Definitions
Chemoinformatics: What is
it and How does it Impact Drug Discovery.
Brown FK. Annual Reports in Medicinal Chemistry. 1998;33:375-384.
Introduction.
Gasteiger J. In: Gasteiger J,
Engel T, eds.
Chemoinformatics: a Textbook.
Understanding
chemoinformatics: a unifying approach.
Bajorath J. Drug Discovery Today.
2004 Jan 1;9(1):13-4.
What is chemical
informatics?
Wiggins
G. Indiana University.
www.indiana.edu/~cheminfo/informatics/cinform_whatis.html
last updated
Editorial opinion:
chemoinformatics - a ten year update.
Brown F.
Curr Opin Drug Discov Devel. 2005 May;8(3):298-302.
Chemistry growth in chemical data
Chemoinformatics: a
Textbook.
Gasteiger J. In: Gasteiger J,
Engel T, eds.
Handbook of
chemoinformatics: from data to knowledge. (4 volumes)
Johann Gasteiger,
ed.
Combinatorial
chemistry and new drugs.
Plunkett MJ, Ellman JA. Scientific American.
1997 Apr:68-73.
Chemical biology growth in data
A
community of chemists and biologists.
Editorial. Nature Chemical Biology.
2005 Jun;1(1):3.
Chemistry & Biology:
Partners in Decoding the Genome
NHGRI & NIGMS,
National Institutes of Health
Conference,
http://www.genome.gov/11008534
Small molecule chemistry
From knowing to
controlling: a path from genomics to drugs using small molecule probes.
Strausberg RL, Schreiber SL. Science. 2003 Apr 11;300(5617):294-5.
Diversity-oriented
synthesis: exploring the intersections between chemistry and biology.
Tan DS. Nature
Chemical Biology. 2005 Jul;1(2):74-84.
High throughput screening growth in data
High-throughput
screening for drug discovery.
Broach JR, Thorner J. Nature. 1996 Nov 7;384(6604
Suppl):14-6.
Small molecule informatics infrastructure
ChemBank Initiative for Chemical Genetics
http://chembank.broad.harvard.edu/
PubChem
http://pubchem.ncbi.nlm.nih.gov/
http://www.genome.gov/12512295
Molecular Libraries
Screening Centers Network
http://grants1.nih.gov/grants/guide/rfa-files/RFA-RM-04-017.html
NIH Molecular
Libraries Initiative.
Information acquisition and sharing and the library
professional
Chemistry
in bioinformatics.
Murray-Rust
P, Mitchell JB, Rzepa HS. BMC Bioinformatics. 2005
Jun 7;6(1):141.
[free
full
text]
Information management and the library professional
SPECTRa: Submission, Preservation and Exposure of
Chemistry Teaching and Research Data
http://www.jisc.ac.uk/index.cfm?name=project_spectra
WorldWideMolecularMatrix
http://www.dspace.cam.ac.uk/handle/1810/724
Information use and the library professional
Information for Chemists
-- Soft/ware
Chemistry software listing
http://www.chem.ac.ru/Chemistry/Soft/
Toms Free Chemistry
Software
http://users.ugent.be/~tkuppens/chem/
The informationist: a new health
profession?
Davidoff F, Florance V. Ann Intern Med. 2000 Jun 20;132(12):996-8.
[free
full text]
MSc Chemical informatics programs
Chemistry plans a
structural overhaul.
Russo E. Nature. 2002 Sep
12;419(6903):4-7.
Indiana University
http://www.informatics.indiana.edu/academics/chem.asp
The
http://www.manchester.ac.uk/degreeprogrammes/postgraduate/taught/1107.htm
The
http://www.shef.ac.uk/is/courses/pg_mscci.html
(computer
science program with chemoinformatics option)
http://genome.uml.edu/programs_grad.htm
Library service models
A library-based
bioinformatics services program.
Yarfitz S, Ketchell DS. Bull Med Libr Assoc.
2000 Jan;88(1):36-48. [free full
text]
A model
for training the new bioinformationist.
Lyon J, Giuse NB, Williams A, Koonce T,
Walden R. J Med Libr Assoc. 2004 Apr;92(2):188-95. [free full
text]
Research Informatics
Consult Service
Eskind Biomedical Library,
http://www.mc.vanderbilt.edu/biolib/services/rics/
BioResearcher Toolkit
http://healthlinks.washington.edu/index.jsp?id=210BCCB7-511A-4C6B-8B40-DFC47AABEA7F